John Thompson is listed in the credits for the following albums:
| Year | Artist | Album | Role |
|---|---|---|---|
| 1970 | Armageddon Experience | The Armageddon Experience | Lead Guitar |
| 1976 | Scott Wesley Brown | I Am A Christian | Songwriter |
| 1980 | Kerry Livgren | Seeds Of Change | Drums |
| 1981 | Michael Card | First Light | Songwriter, Producer, Remixed |
| 1982 | Amy Grant | Age to Age | Songwriter |
| 1983 | Easter Brothers | The Easter Brothers | Producer, Remix, Keyboards |
| 1983 | David Meece | Count the Cost | Songwriter |
| 1983 | Michael Card | Legacy | Producer, Songwriter, Engineer, Piano, Rhodes |
| 1986 | Amy Grant | Collection | Songwriter |
| 1988 | Kim Hill | Kim Hill | Songwriter |
| 1989 | Amy Grant | A Moment In Time | Songwriter |
| 1992 | Kerry Livgren | Decade | Drums |
| 1995 | David Meece | Odyssey | Songwriter |
| 1998 | Dino | Collector's Series, Volume One | Songwriter |
